Gets fluorescence data vectors from RDML object

Gets fluorescence data vectors from RDML object for specified method of experiment.

Arguments

request	Output from AsTable method(RDML.AsTable)
dp.type	Type of fluorescence data (i.e. 'adp' for qPCR or 'mdp' for melting)
long.table	Output table is ready for ggplot (See RDML.AsTable for example)

Value

matrix which contains selected fluorescence data and additional information fromm request if long.table = TRUE.

Author

Konstantin A. Blagodatskikh <k.blag@yandex.ru>, Stefan Roediger <stefan.roediger@b-tu.de>, Michal Burdukiewicz <michalburdukiewicz@gmail.com>

Examples

if (FALSE) {
## internal dataset BioRad_qPCR_melt.rdml (in 'data' directory)
## generated by Bio-Rad CFX96. Contains qPCR and melting data.
## Import without splitting by targets/types and with
## custom name pattern.
PATH <- path.package("RDML")
filename <- paste(PATH, "/extdata/", "BioRad_qPCR_melt.rdml", sep ="")
cfx96 <- RDML$new(filename)
## Select melting fluorescence data with sample.type 'unkn'.
library(dplyr)
tab <- cfx96$AsTable()
fdata <- cfx96$GetFData(filter(tab, sample.type == "unkn"),
                        dp.type = "adp")
## Show names for obtained fdata
colnames(fdata)
}